Table 1 Concordance of MALDI-TOF speciation vs WGS for both clinical and environmental isolates. All non-concordant samples were either of the C. freundii or E. cloacae complex
Clinical isolates | Environmental isolates | Combined clinical and environmental isolates | |
|---|---|---|---|
C. freundii/portucalensis | 0/1 (0%) | 16/21 (76%) | 16/22 (73%) |
E. cloacae/hormaechei | 0/5 (0%) | 3/8 (38%) | 3/12 (25%) |
E. coli | 9/9 (100%) | 11/11 (100%) | 21/21 (100%) |
K. pneumoniae | 10/10 (100%) | 8/8 (100%) | 20/20 (100%) |